CDS

Accession Number TCMCG007C40264
gbkey CDS
Protein Id XP_009101385.1
Location complement(join(27082266..27083034,27083113..27083483))
Gene LOC103827618
GeneID 103827618
Organism Brassica rapa

Protein

Length 379aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA249065
db_source XM_009103137.3
Definition protein phosphatase 1 regulatory inhibitor subunit PPP1R8 homolog [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category S
Description Inner membrane component of T3SS, cytoplasmic domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01009        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13216        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0004857        [VIEW IN EMBL-EBI]
GO:0004864        [VIEW IN EMBL-EBI]
GO:0004865        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0010563        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010921        [VIEW IN EMBL-EBI]
GO:0010923        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0019208        [VIEW IN EMBL-EBI]
GO:0019212        [VIEW IN EMBL-EBI]
GO:0019220        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019888        [VIEW IN EMBL-EBI]
GO:0030234        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031399        [VIEW IN EMBL-EBI]
GO:0031400        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032515        [VIEW IN EMBL-EBI]
GO:0035303        [VIEW IN EMBL-EBI]
GO:0035304        [VIEW IN EMBL-EBI]
GO:0035305        [VIEW IN EMBL-EBI]
GO:0035308        [VIEW IN EMBL-EBI]
GO:0043086        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043666        [VIEW IN EMBL-EBI]
GO:0044092        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045936        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050790        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051174        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051336        [VIEW IN EMBL-EBI]
GO:0051346        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065009        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0098772        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTACGGAAGATCAGGTCTTGACAGGTTTAAAAAGTCTCAAACTTCCGAACCCTTCTCGGTCTCCGCAAACCCCCCAGCGAAGCCGCCACTAGTTCATCGTGTTCCCACGGAGGCGACGCCATTGCCGTCGACGCCGCAAACTCAGATCGGAGCGAGTCAGTCAACTTGGCAACCCCCGGATTGGGCGATTGAGCCACGCGCCGGTGTCTACTCTCTAGAAGTGGTGAAAGACGGCCAGATCCTCGATCGGATTCATCTCAATAGACGGAGACACATCTTCGGAAGACAGCATCAGGCTTGCGACTTCGTGCTTGATCATCAGTCTGTTTCCCGTCAGCACGCCGTCGTGGTTCCCCACAAGAACGGCAGTATCTTTGTGATTGACTTGGGATCAGCTCATGGAACCTTTGTTGCAAACGAGAGGTTAACGAAAGACACTCCTGTAGAGCTTGAAGTGGGTCAATCATTACGTTTTGCTGCCTCCACTAGAATCTACATTCTGAGGAAAAACAGCGAGGCTCTCTTTACACGCCCTCCTCCTCCATCTGAGATCAAGCTTCCACCGCCTCCTGATCCTTCTGACGAGGAAGCTGTTGTTGCGTACAATACTTTGCTTAATCGGTACGGTTTAAGCAATGGAGAATCTGGTTCTGTGCTGGGGAAAAGGAAAGAGAAGGGGGGATCAGAAGGTGAGGTGGGAAAGAGGAGGAAGAAGCTGCGAGTTAGCTTTAGGGATCAACTAGGAGGAGAGCTTGCTGAGGTTGTTGGGATGTCTGATGGAGCAGACGTGGAGACAGAGCCTGGTCCGATTGGTGTCAAAGAAGGGAGCCTTGTTGGGAAATATGAATCGCTGGTGCAAGTGACACTGATACCCAAAGGCAAAGGGAAGGAAGAGAAAGCTTTTGCAGGGAGCAGAGGTGTGACTGATAGACTACAGGAAGCGATGAAGAAGTTAAAAGGAGGTCCAAAAGGAGGGATTTACGATGATCTTTACAGTGGTGACTCACTTACCAAGGCGGTTGGTACTTCATGGGCTTCTTCTGTGAGTGAACCAGCAGCTAAAGATAAAGAAGAAACTAAACGTGGAGGTGTTGTTGATGACGAAGATGATGATAACGATGATCTGTTTGGTGACTGA
Protein:  
MYGRSGLDRFKKSQTSEPFSVSANPPAKPPLVHRVPTEATPLPSTPQTQIGASQSTWQPPDWAIEPRAGVYSLEVVKDGQILDRIHLNRRRHIFGRQHQACDFVLDHQSVSRQHAVVVPHKNGSIFVIDLGSAHGTFVANERLTKDTPVELEVGQSLRFAASTRIYILRKNSEALFTRPPPPSEIKLPPPPDPSDEEAVVAYNTLLNRYGLSNGESGSVLGKRKEKGGSEGEVGKRRKKLRVSFRDQLGGELAEVVGMSDGADVETEPGPIGVKEGSLVGKYESLVQVTLIPKGKGKEEKAFAGSRGVTDRLQEAMKKLKGGPKGGIYDDLYSGDSLTKAVGTSWASSVSEPAAKDKEETKRGGVVDDEDDDNDDLFGD